SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12942

Signal sequence   MWLQLGLPSLSLSPTPTVGRSLCLILWFLSLVLRAST

Length  37

Organism  Rattus norvegicus (Rat)

UniProt ID  Q62889,

Motif  1..37



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12942.cif

Structure  SPKB12942.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4070.95054

Aliphatic index  144.8648649

Isoelectric point  10.52640717

Charge (pH=7)   1.936002961

Topological polar surface area  1465.09

Aromaticity  0.081081081

Average rotatable bonds  3.405405405

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  52

X logP energy  -9.22056

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.