SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12940

Signal sequence   MPKGRQKVPRLDARLGLPICLCLELAIFFLVPQVMG

Length  36

Organism  Rattus norvegicus (Rat)

UniProt ID  Q62849,

Motif  1..36



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12940.cif

Structure  SPKB12940.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4024.01994

Aliphatic index  127.2222222

Isoelectric point  9.754928767

Charge (pH=7)   2.875656473

Topological polar surface area  1445.18

Aromaticity  0.055555556

Average rotatable bonds  3.638888889

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  50

X logP energy  -6.52249

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.