SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12934

Signal sequence   MALPRCMWPNYVWRAMMACVVHRGSGAPLTLCLLGCLLQTFHVLS

Length  45

Organism  Rattus norvegicus (Rat)

UniProt ID  Q62765,

Motif  1..45



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  8G7D,

Predicted Structure ID  SPKB12934.cif

Structure  SPKB12934.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5048.19224

Aliphatic index  104

Isoelectric point  8.687450985

Charge (pH=7)   2.931043269

Topological polar surface area  1779.32

Aromaticity  0.088888889

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  67

Number of hydrogen bond acceptors  66

X logP energy  -10.80619

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.