SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12784

Signal sequence   MPGVDISFLKKSGRRTMAAAAVIALLGG

Length  28

Organism  Nocardia farcinica (strain IFM 10152)

UniProt ID  Q5YXD6,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12784.cif

Structure  SPKB12784.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2831.43084

Aliphatic index  108.2142857

Isoelectric point  11.65088966

Charge (pH=7)   2.997834093

Topological polar surface area  1114.06

Aromaticity  0.035714286

Average rotatable bonds  3.392857143

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  39

X logP energy  -10.46476

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.