SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12733

Signal sequence   MSSKRPCSIVGSFWMLWIWTATSMVARA

Length  28

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  Q5RH73,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12733.cif

Structure  SPKB12733.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3203.84674

Aliphatic index  73.21428571

Isoelectric point  11.48119255

Charge (pH=7)   2.935707927

Topological polar surface area  1179.03

Aromaticity  0.142857143

Average rotatable bonds  3.535714286

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  43

X logP energy  -8.88206

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.