SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12690

Signal sequence   MKKREHLGLGFFEWQIILWLSIWLAISQQALG

Length  32

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q5PP23,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12690.cif

Structure  SPKB12690.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3813.56424

Aliphatic index  128.125

Isoelectric point  9.536923005

Charge (pH=7)   1.091850257

Topological polar surface area  1399.74

Aromaticity  0.15625

Average rotatable bonds  3.96875

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  45

X logP energy  -3.76963

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.