SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12688

Signal sequence   MQIMATQNSKSNIFWSSSASVVLVLLLLVDVGVC

Length  34

Organism  Cryptomeria japonica (Japanese cedar) (Cupressus japonica)

UniProt ID  Q5NTA4,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12688.cif

Structure  SPKB12688.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3654.35594

Aliphatic index  137.3529412

Isoelectric point  6.160569088

Charge (pH=7)   -0.063838966

Topological polar surface area  1416.7

Aromaticity  0.058823529

Average rotatable bonds  3.558823529

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  51

X logP energy  -13.0506

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.