SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12470

Signal sequence   MSKLITTEPLKSMAEVISNYAMKQQSVSERNIPKKQSLLRKEITYETEVQTSADSIWNVYSSPDIPRLLRDVLLPGVFEKLDVIAGNGGVGTVLDIAFPLGAVPRRYKEKFVKINHEKRLKEVVMIEGGYLDMGCTFYMDRIHIFEKTPNSCVIESSIIYEVKEEYAGKMAKLITTEPLESMAEVISGYVLKKRLQVFGFEIKPKLRFNLLLCLIICLVIAGGMFVAGVPL

Length  100

Organism  Papaver somniferum (Opium poppy)

UniProt ID  Q4QTJ2,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12470.cif

Structure  SPKB12470.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  26014.75054

Aliphatic index  107.0995671

Isoelectric point  8.569439481

Charge (pH=7)   2.956943944

Topological polar surface area  10084.18

Aromaticity  0.082251082

Average rotatable bonds  3.818181818

Number of hydrogen bond donors  351

Number of hydrogen bond acceptors  350

X logP energy  -137.852

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.