SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12469

Signal sequence   MSKLITTEPLKSMAEVISNYVIQRESFSARNILNKNSLVKKEIRYDLEVPTSADSIWSVYSCPDIPRLLRDVLLPGVFQKLDVIEGNGGVGTVLDIVFPPGAVPRSYKEKFVNINHEKRLKEVIMIEGGYLDMGCTFYMDRIHIFEKTPNSCVIESSIIYEVKEEYAGKMAKLITTEPLESMAEVISGYVLKKRLQVFGFEIKPKLRFNLLLCLIICLVIAGGMFVAGVPL

Length  100

Organism  Papaver somniferum (Opium poppy)

UniProt ID  Q4QTJ1,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12469.cif

Structure  SPKB12469.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  26000.72294

Aliphatic index  110.8658009

Isoelectric point  7.830209027

Charge (pH=7)   0.894230657

Topological polar surface area  10003.12

Aromaticity  0.086580087

Average rotatable bonds  3.783549784

Number of hydrogen bond donors  348

Number of hydrogen bond acceptors  347

X logP energy  -135.2926

Hydropathy 



Literature Information


Title  Norcoclaurine synthase is a member of the pathogenesis-related 10/Bet v1 protein family.

DOI  10.1105/tpc.110.077958,

Publication Year  2010

PubMed ID  21037103,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.