SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12455

Signal sequence   MRTDVFLQRRKRRDVLLSIIALLLLIFAIVHLVFC

Length  35

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  Q49SH1,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12455.cif

Structure  SPKB12455.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4183.22114

Aliphatic index  172.5714286

Isoelectric point  11.93456576

Charge (pH=7)   4.027500052

Topological polar surface area  1575.07

Aromaticity  0.085714286

Average rotatable bonds  4.057142857

Number of hydrogen bond donors  59

Number of hydrogen bond acceptors  50

X logP energy  -5.49135

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.