SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12438

Signal sequence   MKLLWQVTVHHTWNAVLLPVVYLTAQVWILCAAIAAAASA

Length  40

Organism  Rattus norvegicus (Rat)

UniProt ID  Q45R42,

Motif  1..40



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12438.cif

Structure  SPKB12438.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4374.27394

Aliphatic index  144

Isoelectric point  8.537852463

Charge (pH=7)   1.116682317

Topological polar surface area  1550.6

Aromaticity  0.1

Average rotatable bonds  3.3

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  54

X logP energy  -6.2995

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.