SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12429

Signal sequence   MANAKPFCLLGFFCLLLQLFSIFHIGNG

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q42580,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12429.cif

Structure  SPKB12429.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3115.80534

Aliphatic index  118.5714286

Isoelectric point  8.241247528

Charge (pH=7)   0.964648925

Topological polar surface area  1044.43

Aromaticity  0.178571429

Average rotatable bonds  3.535714286

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  38

X logP energy  -3.7735

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.