SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12349

Signal sequence   MNEKLRILFSFLCFFYVLLVSPSQSNG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q3E8W4,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12349.cif

Structure  SPKB12349.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3153.74744

Aliphatic index  108.1481481

Isoelectric point  8.522883439

Charge (pH=7)   0.936635947

Topological polar surface area  1166.77

Aromaticity  0.185185185

Average rotatable bonds  3.777777778

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  41

X logP energy  -7.42613

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.