SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12345

Signal sequence   MSSSLIFKLFFFSLFFSNRLAS

Length  22

Organism  Cucumis melo (Muskmelon)

UniProt ID  Q39547,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12345.cif

Structure  SPKB12345.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2590.07784

Aliphatic index  93.18181818

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  926.81

Aromaticity  0.272727273

Average rotatable bonds  3.818181818

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  33

X logP energy  -5.73973

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.