SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12339

Signal sequence   MRSVPNYHHSFFIFLILILFLAFSVSPNTLS

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q39086,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12339.cif

Structure  SPKB12339.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3612.29284

Aliphatic index  122.5806452

Isoelectric point  9.353535051

Charge (pH=7)   1.178948756

Topological polar surface area  1265.79

Aromaticity  0.193548387

Average rotatable bonds  3.548387097

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  45

X logP energy  -6.14173

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.