SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12281

Signal sequence   MKYRRLSLAHARQDSGQAASNARSRRFARLLCSSIAPLALGFSADAFA

Length  48

Organism  Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)

UniProt ID  Q2T6X7,

Motif  1..48



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12281.cif

Structure  SPKB12281.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5210.97304

Aliphatic index  79.79166667

Isoelectric point  12.11889003

Charge (pH=7)   6.026643016

Topological polar surface area  2275.94

Aromaticity  0.083333333

Average rotatable bonds  3.604166667

Number of hydrogen bond donors  85

Number of hydrogen bond acceptors  73

X logP energy  -27.90661

Hydropathy 



Literature Information


Title  A polar-localized iron-binding protein determines the polar targeting of Burkholderia BimA autotransporter and actin tail formation.

DOI  10.1111/cmi.12376,

Publication Year  2015

PubMed ID  25293534,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.