SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12088

Signal sequence   MSPYDSSPWATKALFLIVTLLAQFTYS

Length  27

Organism  Caenorhabditis elegans

UniProt ID  Q21313,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12088.cif

Structure  SPKB12088.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3051.54714

Aliphatic index  94.07407407

Isoelectric point  6.324009879

Charge (pH=7)   -0.003565079

Topological polar surface area  1106.61

Aromaticity  0.185185185

Average rotatable bonds  3.37037037

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  41

X logP energy  -7.1984

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.