SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12013

Signal sequence   MYIVIVTMRTILFFGIFFIFIFQCAKC

Length  27

Organism  Caenorhabditis elegans

UniProt ID  Q17800,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12013.cif

Structure  SPKB12013.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3266.12784

Aliphatic index  126.2962963

Isoelectric point  8.798094803

Charge (pH=7)   1.872886108

Topological polar surface area  1011.62

Aromaticity  0.259259259

Average rotatable bonds  3.851851852

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  38

X logP energy  1.47877

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.