SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB11806

Signal sequence   MHQPPVRFTYRLLSYLISTIIAGQPLLPAVGA

Length  32

Organism  Escherichia coli O6:K15:H31 (strain 536 / UPEC)

UniProt ID  Q0T963,

Motif  1..32



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB11806.cif

Structure  SPKB11806.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3524.22794

Aliphatic index  125

Isoelectric point  10.1185677

Charge (pH=7)   2.087185939

Topological polar surface area  1290.3

Aromaticity  0.09375

Average rotatable bonds  3.3125

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  45

X logP energy  -7.88286

Hydropathy 



Literature Information


Title  CdiA Effectors Use Modular Receptor-Binding Domains To Recognize Target Bacteria.

DOI  10.1128/mBio.00290-17,

Publication Year  2017

PubMed ID  28351921,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.