SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB11618

Signal sequence   LPLCCYLRLVSA

Length  12

Organism  Rattus norvegicus (Rat)

UniProt ID  Q05028,

Motif  <1..12



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB11618.cif

Structure  SPKB11618.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1350.70024

Aliphatic index  162.5

Isoelectric point  8.222829177

Charge (pH=7)   0.873181142

Topological polar surface area  476.99

Aromaticity  0.083333333

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  19

Number of hydrogen bond acceptors  18

X logP energy  -1.83893

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.