SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB11218

Signal sequence   MSRLRSLLSLILVLVTTVLVS

Length  21

Organism  Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)

UniProt ID  P73048,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cellular thylakoid membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB11218.cif

Structure  SPKB11218.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2313.91144

Aliphatic index  203.8095238

Isoelectric point  12.50010931

Charge (pH=7)   1.997977677

Topological polar surface area  890.5

Aromaticity  0

Average rotatable bonds  3.714285714

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  31

X logP energy  -5.90246

Hydropathy 



Literature Information


Title  A method for analyzing lipid-modified proteins with mass spectrometry.

DOI  10.1016/j.ab.2007.11.014,

Publication Year  2008

PubMed ID  18078799,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.