SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB10879

Signal sequence   MSAWLLPAGGFPGAGFCIPAWQSRSSLSRVLRWPGPGLPGLLLLLLLPSPSAFS

Length  54

Organism  Rattus norvegicus (Rat)

UniProt ID  P51840,

Motif  1..54



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB10879.cif

Structure  SPKB10879.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5647.73054

Aliphatic index  108.5185185

Isoelectric point  12.19926402

Charge (pH=7)   2.93599965

Topological polar surface area  1973.3

Aromaticity  0.111111111

Average rotatable bonds  3.055555556

Number of hydrogen bond donors  69

Number of hydrogen bond acceptors  69

X logP energy  -13.50639

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.