SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB10583

Signal sequence   MSSKATLALLIYGIIMHYSVYS

Length  22

Organism  Oncorhynchus nerka (Sockeye salmon) (Salmo nerka)

UniProt ID  P41585,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB10583.cif

Structure  SPKB10583.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2461.96004

Aliphatic index  128.6363636

Isoelectric point  9.051719169

Charge (pH=7)   1.086047114

Topological polar surface area  890.96

Aromaticity  0.136363636

Average rotatable bonds  3.590909091

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  35

X logP energy  -5.0212

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.