SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB10400

Signal sequence   MVQLGKLLRVLTLMKFPCCVLEVLLCVLAAAARG

Length  34

Organism  Rattus norvegicus (Rat)

UniProt ID  P35400,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB10400.cif

Structure  SPKB10400.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3673.70124

Aliphatic index  157.6470588

Isoelectric point  8.985504056

Charge (pH=7)   2.813238584

Topological polar surface area  1291.29

Aromaticity  0.029411765

Average rotatable bonds  3.617647059

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  47

X logP energy  -5.22586

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.