SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB10078

Signal sequence   MAVTSHHMIPVMVVLMSACLATA

Length  23

Organism  Rattus norvegicus (Rat)

UniProt ID  P26342,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB10078.cif

Structure  SPKB10078.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2414.01374

Aliphatic index  118.6956522

Isoelectric point  7.523974965

Charge (pH=7)   0.117827765

Topological polar surface area  833.01

Aromaticity  0

Average rotatable bonds  3.260869565

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  35

X logP energy  -5.968

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.