SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09818

Signal sequence   MTARGTRKNYQRLWRWGTMLLGMLMICSAAE

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)

UniProt ID  P20888,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09818.cif

Structure  SPKB09818.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3646.38354

Aliphatic index  72.58064516

Isoelectric point  11.36087165

Charge (pH=7)   3.936626013

Topological polar surface area  1466.15

Aromaticity  0.096774194

Average rotatable bonds  3.935483871

Number of hydrogen bond donors  56

Number of hydrogen bond acceptors  50

X logP energy  -12.21232

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.