SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09817

Signal sequence   MCGRNQLFVASLLASACLIYCVQY

Length  24

Organism  Human immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2)

UniProt ID  P20872,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09817.cif

Structure  SPKB09817.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2667.21244

Aliphatic index  117.9166667

Isoelectric point  8.036790037

Charge (pH=7)   0.810356012

Topological polar surface area  1004.71

Aromaticity  0.125

Average rotatable bonds  3.541666667

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  37

X logP energy  -7.88163

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.