SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09816

Signal sequence   MRVKGIRKNYQHLWKGGILLLGTLMICSAVE

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)

UniProt ID  P20871,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09816.cif

Structure  SPKB09816.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3529.32694

Aliphatic index  122.5806452

Isoelectric point  10.63360837

Charge (pH=7)   4.026951659

Topological polar surface area  1366.82

Aromaticity  0.064516129

Average rotatable bonds  3.935483871

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  47

X logP energy  -8.46496

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.