SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09802

Signal sequence   MDTGLCAPLRGLSGLLLLLCALPWAEG

Length  27

Organism  Rattus norvegicus (Rat)

UniProt ID  P20720,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09802.cif

Structure  SPKB09802.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2784.38554

Aliphatic index  141.1111111

Isoelectric point  4.184341721

Charge (pH=7)   -1.123746837

Topological polar surface area  995.09

Aromaticity  0.037037037

Average rotatable bonds  3.222222222

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  36

X logP energy  -5.67173

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.