SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09600

Signal sequence   MADAPGLIPIFLLGYLLSTEC

Length  21

Organism  Rattus norvegicus (Rat)

UniProt ID  P16296,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09600.cif

Structure  SPKB09600.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2237.69724

Aliphatic index  139.5238095

Isoelectric point  3.550065682

Charge (pH=7)   -2.062619224

Topological polar surface area  763.03

Aromaticity  0.095238095

Average rotatable bonds  3.238095238

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  29

X logP energy  -2.6815

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.