SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09427

Signal sequence   MGAATETFYSVIRRQGITRRSFHKFCSLTATSLGLGPLAASRIANA

Length  46

Organism  Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)

UniProt ID  P12635,

Motif  1..46



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09427.cif

Structure  SPKB09427.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4929.69594

Aliphatic index  80.86956522

Isoelectric point  11.94135695

Charge (pH=7)   5.027531793

Topological polar surface area  2074.24

Aromaticity  0.086956522

Average rotatable bonds  3.5

Number of hydrogen bond donors  78

Number of hydrogen bond acceptors  70

X logP energy  -24.99425

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.