SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09418

Signal sequence   MRVKGIRKNYQHLWRWGTMLLGILMICSAAE

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate JH32) (HIV-1)

UniProt ID  P12489,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09418.cif

Structure  SPKB09418.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3676.48104

Aliphatic index  103.8709677

Isoelectric point  10.8735318

Charge (pH=7)   4.027243381

Topological polar surface area  1418.49

Aromaticity  0.096774194

Average rotatable bonds  4

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  48

X logP energy  -8.16719

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.