SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09416

Signal sequence   MRVRGIERNCQNLWKWGIMLLGILMTCSNAD

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) (HIV-1)

UniProt ID  P12487,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09416.cif

Structure  SPKB09416.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3623.34604

Aliphatic index  100.6451613

Isoelectric point  8.827928922

Charge (pH=7)   1.875951507

Topological polar surface area  1467.04

Aromaticity  0.064516129

Average rotatable bonds  3.967741935

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  49

X logP energy  -12.07489

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.