SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09270

Signal sequence   MNRARLQLASLWLLLTVTLQAVASAMG

Length  27

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  P0DPR2,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09270.cif

Structure  SPKB09270.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2928.54734

Aliphatic index  141.1111111

Isoelectric point  12.50010931

Charge (pH=7)   1.997977677

Topological polar surface area  1169.7

Aromaticity  0.037037037

Average rotatable bonds  3.592592593

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  39

X logP energy  -9.72196

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.