SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09255

Signal sequence   MTKNISRDRHVAVLPFPFSSHAGRLLTLVRRLAAAAPNVTFSFYSTPKSIESLFSPAERVPGNVRPYAVPDGVPEGHVFSGEPVEHVNLYLTAVGEGESLRGVLKAAEAETGRRIGCVMSDAFMWFAGDLAEEMGVPWVPFMAGGANSITAHFYTDLIRETVGMHDIVGRENDIVKFIPGFSELRLGDLPTGVLFGNLESPFAIMLHKMGRALPKATAIAINSFEELDPDIIQDLKSKFKMILNVSPFSAISLPSSPPPPPTSYTDEYGCMPWLDNRKAASVAYIGFGTLATPPPVEIAALAEALEASGTPFLWSLKDNPKEFFPEGFIKRTSERQKIVPWAPQEQVLAHGSVGVFVTHCGWNSALESIAAGVPLIGRPFFGDHQLNAWLVENVWKIGVRVEGGVFTKSGTMSALELVLTHEKQKELRARVEMFKKLALKAVGPEQSSTRNLHTLLEIVAGYNL

Length  100

Organism  Rhododendron delavayi (Rhododendron) (Rhododendron arboreum subsp. delavayi)

UniProt ID  P0DO58,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09255.cif

Structure  SPKB09255.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  50622.28774

Aliphatic index  89.54741379

Isoelectric point  6.517991992

Charge (pH=7)   -5.043051195

Topological polar surface area  19712.37

Aromaticity  0.092672414

Average rotatable bonds  2.155172414

Number of hydrogen bond donors  675

Number of hydrogen bond acceptors  671

X logP energy  -397.87126

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.