SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09170

Signal sequence   MNPSTPSLLYTSIFFYFTIIATQTLS

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P0C5E2,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09170.cif

Structure  SPKB09170.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2957.43104

Aliphatic index  93.84615385

Isoelectric point  6.08660263

Charge (pH=7)   -0.003716529

Topological polar surface area  1081.95

Aromaticity  0.192307692

Average rotatable bonds  3.384615385

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  41

X logP energy  -8.7809

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.