SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09169

Signal sequence   MVLIRVQANLLILQLSYA

Length  18

Organism  Gloydius shedaoensis (Shedao island pit viper) (Agkistrodon shedaoensis)

UniProt ID  P0C5B4,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09169.cif

Structure  SPKB09169.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2058.55334

Aliphatic index  195

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  789.65

Aromaticity  0.055555556

Average rotatable bonds  3.833333333

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  26

X logP energy  -3.32223

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.