SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09089

Signal sequence   MSPCGYYSKWRNRDRPEYRRNLRFRRFFSSIHPNAAAGSGFNGPGVFITSVTGVWLCFLCIFSMFVTAVVS

Length  71

Organism  Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3)

UniProt ID  P09257,

Motif  1..71



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  6VLK,

Predicted Structure ID  SPKB09089.cif

Structure  SPKB09089.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  8133.40484

Aliphatic index  63.09859155

Isoelectric point  10.73065786

Charge (pH=7)   6.902318083

Topological polar surface area  3176.82

Aromaticity  0.183098592

Average rotatable bonds  3.549295775

Number of hydrogen bond donors  119

Number of hydrogen bond acceptors  107

X logP energy  -29.90734

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.