SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09077

Signal sequence   MTRLVTLELLMAGIGSALLCFPDCILGED

Length  29

Organism  Rattus norvegicus (Rat)

UniProt ID  P09006,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09077.cif

Structure  SPKB09077.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3095.73594

Aliphatic index  137.9310345

Isoelectric point  3.737907299

Charge (pH=7)   -3.12152523

Topological polar surface area  1141.12

Aromaticity  0.034482759

Average rotatable bonds  3.517241379

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  42

X logP energy  -7.21153

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.