SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB09010

Signal sequence   MGKISSLPTQLFKICLCDFLKIKIHIMSSSHLFYLALCLLTFTSSATAGPETLCGAELVDALQFVCGPRGFYFNKPTGYGSSIRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPTKSARSIRAQRHTDMPKTQKEVHLKNTSRGSAGNKTYRM

Length  100

Organism  Rattus norvegicus (Rat)

UniProt ID  P08025,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB09010.cif

Structure  SPKB09010.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  17079.00024

Aliphatic index  75.29411765

Isoelectric point  9.764946063

Charge (pH=7)   11.80742239

Topological polar surface area  6842.89

Aromaticity  0.08496732

Average rotatable bonds  3.705882353

Number of hydrogen bond donors  252

Number of hydrogen bond acceptors  243

X logP energy  -71.51113

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.