SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08952

Signal sequence   MRRAGAACSAMDRLRLLLLLILGVSSGGA

Length  29

Organism  Rattus norvegicus (Rat)

UniProt ID  P07174,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08952.cif

Structure  SPKB08952.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2972.62184

Aliphatic index  134.8275862

Isoelectric point  12.02327059

Charge (pH=7)   2.936442822

Topological polar surface area  1223.71

Aromaticity  0

Average rotatable bonds  3.517241379

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  41

X logP energy  -12.43672

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.