SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08886

Signal sequence   MKVKGIQGNWQNWWKWGTLILGLVIICSAAE

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype A (isolate Z321) (HIV-1)

UniProt ID  P05881,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08886.cif

Structure  SPKB08886.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3544.23574

Aliphatic index  113.2258065

Isoelectric point  9.581486058

Charge (pH=7)   1.936899605

Topological polar surface area  1327.66

Aromaticity  0.129032258

Average rotatable bonds  3.741935484

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  44

X logP energy  -6.372

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.