SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08885

Signal sequence   MRVKGIMRNCQHLWIWGTMLFGMWMICSAVE

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22) (HIV-1)

UniProt ID  P05880,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08885.cif

Structure  SPKB08885.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3729.59224

Aliphatic index  84.83870968

Isoelectric point  8.831029573

Charge (pH=7)   1.966417425

Topological polar surface area  1326.13

Aromaticity  0.129032258

Average rotatable bonds  3.935483871

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  48

X logP energy  -5.56116

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.