SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08824

Signal sequence   MRTLSLLTLLALTAFCLSDLAGA

Length  23

Organism  Rattus norvegicus (Rat)

UniProt ID  P04640,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08824.cif

Structure  SPKB08824.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2394.91334

Aliphatic index  153.0434783

Isoelectric point  6.161167719

Charge (pH=7)   -0.063547244

Topological polar surface area  903.87

Aromaticity  0.043478261

Average rotatable bonds  3.391304348

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  33

X logP energy  -7.06573

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.