SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08811

Signal sequence   MDRGAVVGFLLGVCVVSCLA

Length  20

Organism  Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1)

UniProt ID  P04488,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08811.cif

Structure  SPKB08811.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2009.47084

Aliphatic index  141

Isoelectric point  6.064584924

Charge (pH=7)   -0.12552196

Topological polar surface area  735.65

Aromaticity  0.05

Average rotatable bonds  3.2

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  27

X logP energy  -5.45253

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.