SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08756

Signal sequence   MKVKGTRRNYQHLWRWGTLLLGMLMICSATE

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)

UniProt ID  P03378,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08756.cif

Structure  SPKB08756.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3694.45304

Aliphatic index  88.06451613

Isoelectric point  10.8735318

Charge (pH=7)   4.027243381

Topological polar surface area  1458.95

Aromaticity  0.096774194

Average rotatable bonds  4

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  50

X logP energy  -10.47159

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.