SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08754

Signal sequence   MRVKEKYQHLWRWGWRWGTMLLGMLMICSATE

Length  32

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)

UniProt ID  P03375,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  4R4H,

Predicted Structure ID  SPKB08754.cif

Structure  SPKB08754.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3998.81924

Aliphatic index  73.125

Isoelectric point  10.2483285

Charge (pH=7)   3.029018504

Topological polar surface area  1493.61

Aromaticity  0.15625

Average rotatable bonds  4.09375

Number of hydrogen bond donors  57

Number of hydrogen bond acceptors  51

X logP energy  -6.22319

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.