SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08517

Signal sequence   MMDFHFSFLFLLIGTSES

Length  18

Organism  Rattus norvegicus (Rat)

UniProt ID  O88488,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Cell projection

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08517.cif

Structure  SPKB08517.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2122.48124

Aliphatic index  86.66666667

Isoelectric point  4.181153034

Charge (pH=7)   -1.908885003

Topological polar surface area  742.22

Aromaticity  0.222222222

Average rotatable bonds  3.777777778

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  28

X logP energy  -3.4043

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.