SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08506

Signal sequence   MARRPLWWGLPGPSTPLLLLLLFSLFPSSRE

Length  31

Organism  Rattus norvegicus (Rat)

UniProt ID  O88278,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08506.cif

Structure  SPKB08506.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3552.28404

Aliphatic index  116.4516129

Isoelectric point  12.19913393

Charge (pH=7)   1.999749488

Topological polar surface area  1248.1

Aromaticity  0.129032258

Average rotatable bonds  3.387096774

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  42

X logP energy  -5.13799

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.