SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08405

Signal sequence   METQRNYPSLWRWGTLILGMLLICSAAQ

Length  28

Organism  Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)

UniProt ID  O70902,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08405.cif

Structure  SPKB08405.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3252.85784

Aliphatic index  104.6428571

Isoelectric point  8.527156199

Charge (pH=7)   0.936927669

Topological polar surface area  1263.33

Aromaticity  0.107142857

Average rotatable bonds  3.714285714

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  43

X logP energy  -9.00436

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.